Stardate not given: While Tom's "Capt. Proton" program is running, photonic beings from subspace enter the holodeck, mistaking the simulation for the real world. The crew have to convince the aliens of their peaceful nature and support them in their struggle against the evil Dr. Chaotica, who fights them with holoweapons, deadly to photonic beings. Janeway aka Queen Arachnia and Tom aka Proton finally manage to defeat Chaotica and save the aliens.

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